Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 MIR3186-201ENST00000577404 85 ntBASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 RMST_8.1-201ENST00000610287 165 ntBASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 MIR622-201ENST00000638396 96 ntBASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 AL136360.1-201ENST00000503377 1900 ntBASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM39AQ9NV64 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNA5SP432-201ENST00000362480 116 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNU6-1290P-201ENST00000362957 109 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNU6-271P-201ENST00000363858 105 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNU6-407P-201ENST00000365280 104 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNU6-975P-201ENST00000384296 105 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 SNORD116-13-201ENST00000384408 92 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 MIR15B-201ENST00000385045 98 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 SNORA40-201ENST00000388090 126 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNU6-1228P-201ENST00000391014 107 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RPL30P13-201ENST00000418873 348 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 AC002075.2-201ENST00000425207 252 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 AC010598.1-201ENST00000510378 103 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNA5SP367-201ENST00000516557 118 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNU6-586P-201ENST00000517265 104 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 AC023043.3-201ENST00000593113 385 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 AL365222.1-201ENST00000614661 98 ntBASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.47□□□□□ -1.85
TMEM39AQ9NV64 RNU6-199P-201ENST00000362954 107 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 RNU1-72P-201ENST00000362976 153 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 SNORD31B-201ENST00000364977 69 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 SNORD50B-201ENST00000364995 70 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 RNU6-1027P-201ENST00000383998 107 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 SNORA54-201ENST00000384281 123 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 SNORA22C-201ENST00000384614 134 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 MIR184-201ENST00000384962 84 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 RNU6-1168P-201ENST00000390831 104 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 RNU1-101P-201ENST00000391171 127 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 RPS26P55-201ENST00000471178 356 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 RNU6-561P-201ENST00000516222 102 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 SCARNA11.3-201ENST00000517276 130 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 AC027419.1-201ENST00000522976 328 ntBASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TMEM39AQ9NV64 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 RNU6-643P-201ENST00000384018 107 ntBASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 RAC1P5-201ENST00000512182 576 ntBASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 POLR3GP1-201ENST00000594073 261 ntBASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 AP003357.1-201ENST00000604497 148 ntBASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 uc_338.25-201ENST00000613756 156 ntBASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 MAPK10-322ENST00000641485 4530 ntBASIC3.45□□□□□ -1.86
TMEM39AQ9NV64 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 AL356292.1-201ENST00000283110 373 ntBASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 RNU6-728P-201ENST00000365375 104 ntBASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 SNORA20-201ENST00000384662 132 ntBASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 SNORD37.2-201ENST00000391075 66 ntBASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 AL139132.1-201ENST00000431587 344 ntBASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 RNU6-948P-201ENST00000516374 107 ntBASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 MIR4425-201ENST00000580572 84 ntBASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TMEM39AQ9NV64 RNA5SP139-201ENST00000364340 117 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 RNU6-1323P-201ENST00000384025 107 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 RNU6-418P-201ENST00000384035 107 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 MIR218-1-201ENST00000384999 110 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 RNU6-735P-201ENST00000410612 107 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 RNA5SP229-201ENST00000410809 99 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 MTND4LP9-201ENST00000427694 174 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 RPL30P4-201ENST00000429309 333 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 RPS12P18-201ENST00000442381 270 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 AL135938.1-201ENST00000443141 297 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 RNA5SP20-201ENST00000515976 84 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 MIR4319-201ENST00000577285 85 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 MIR4435-1-201ENST00000582552 80 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 AC005972.2-201ENST00000604690 348 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
TMEM39AQ9NV64 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms