Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
VTI1AQ96AJ9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 SNORA68.1-201ENST00000364537 132 ntBASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 RNU6-728P-201ENST00000365375 104 ntBASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 RNU6-1323P-201ENST00000384025 107 ntBASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 RNU6-768P-201ENST00000384683 107 ntBASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 RPL27AP5-201ENST00000469428 449 ntBASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 EIF4BP1-201ENST00000554881 351 ntBASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 MIR3616-201ENST00000584070 92 ntBASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 POLR3GP1-201ENST00000594073 261 ntBASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTI1AQ96AJ9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 Y_RNA.71-201ENST00000362892 104 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 RNY1P11-201ENST00000363759 113 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 RNU6-271P-201ENST00000363858 105 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 RNA5SP205-201ENST00000364653 136 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 SNORD31B-201ENST00000364977 69 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 SNORD37.2-201ENST00000391075 66 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 RN7SKP111-201ENST00000410349 271 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 RPL30P4-201ENST00000429309 333 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 S100A11P2-201ENST00000467589 312 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 AC092991.1-201ENST00000477176 376 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 RNA5SP20-201ENST00000515976 84 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 RNU6-1234P-201ENST00000516877 103 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 AC093732.2-201ENST00000607950 274 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 RMST_8.1-201ENST00000610287 165 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 AC017071.1-201ENST00000564407 2204 ntBASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
VTI1AQ96AJ9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 MIR422A-201ENST00000362286 90 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 Y_RNA.127-201ENST00000363386 109 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 RNU6-418P-201ENST00000384035 107 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 MIR184-201ENST00000384962 84 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AL135786.1-201ENST00000415892 214 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 MICF-203ENST00000432679 129 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AC006539.3-201ENST00000454258 129 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AC016925.1-201ENST00000458303 298 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 RNU6-1211P-201ENST00000459179 105 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AC021205.2-201ENST00000480069 347 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 RPL36AP21-201ENST00000490372 323 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 RNU6-586P-201ENST00000517265 104 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 MIR5004-201ENST00000579078 107 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AL356274.2-201ENST00000624379 3752 ntBASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VTI1AQ96AJ9 AL355596.1-201ENST00000565399 3996 ntBASIC3.78□□□□□ -1.81
VTI1AQ96AJ9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 SNORD21-201ENST00000383953 95 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 Y_RNA.629-201ENST00000411368 105 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 AC016909.1-201ENST00000415916 166 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 AC090515.1-201ENST00000465295 476 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 RNU6-1333P-201ENST00000516162 93 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 RNU6-965P-201ENST00000516721 96 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 AC025647.1-201ENST00000517879 253 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 AC018630.3-201ENST00000542637 96 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 AC005972.2-201ENST00000604690 348 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.77□□□□□ -1.81
VTI1AQ96AJ9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 RNU6-460P-201ENST00000391158 108 ntBASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 RNU4-43P-201ENST00000410628 137 ntBASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 RPL23AP54-201ENST00000495129 419 ntBASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 AL031274.2-201ENST00000599419 203 ntBASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 MIR1248-201ENST00000629190 106 ntBASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 MIR7157-201ENST00000635801 60 ntBASIC3.76□□□□□ -1.81
VTI1AQ96AJ9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
VTI1AQ96AJ9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VTI1AQ96AJ9 SNORD116-14-201ENST00000383894 92 ntBASIC3.75□□□□□ -1.81
VTI1AQ96AJ9 SNORD116-17-201ENST00000383929 92 ntBASIC3.75□□□□□ -1.81
VTI1AQ96AJ9 RNY3P5-201ENST00000384127 102 ntBASIC3.75□□□□□ -1.81
VTI1AQ96AJ9 SNORD116-15-201ENST00000384445 92 ntBASIC3.75□□□□□ -1.81
VTI1AQ96AJ9 SNORD116-19-201ENST00000384729 92 ntBASIC3.75□□□□□ -1.81
VTI1AQ96AJ9 RNA5SP511-201ENST00000410487 115 ntBASIC3.75□□□□□ -1.81
VTI1AQ96AJ9 RNU4-47P-201ENST00000410876 114 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms