Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 RNU1-91P-201ENST00000364746 163 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 Y_RNA.432-201ENST00000384087 111 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 RNU11-5P-201ENST00000391216 129 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 MIR1262-201ENST00000408276 93 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 RNU6-628P-201ENST00000410675 107 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 ATP5J2P3-201ENST00000451550 258 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 YWHAEP4-201ENST00000505390 198 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 RNU6-1291P-201ENST00000516591 104 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 NDUFA5P6-201ENST00000542110 379 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.29□□□□□ -1.88
CITED4Q96RK1 U4atac.1-201ENST00000618345 95 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 AC012640.5-201ENST00000623897 319 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 RNA5SP196-201ENST00000625967 102 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 MIR338-201ENST00000636369 67 ntBASIC3.29□□□□□ -1.88
CITED4Q96RK1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CITED4Q96RK1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CITED4Q96RK1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CITED4Q96RK1 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CITED4Q96RK1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CITED4Q96RK1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CITED4Q96RK1 RNU6-1209P-201ENST00000363655 107 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 RNU1-96P-201ENST00000364163 162 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 SNORD113-1-201ENST00000365321 69 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 RNU1-13P-201ENST00000384499 162 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 RNU6-1081P-201ENST00000384537 107 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 SNORA40-201ENST00000388090 126 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 UBBP3-201ENST00000445497 241 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.28□□□□□ -1.88
CITED4Q96RK1 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 uc_338.4-201ENST00000616635 176 ntBASIC3.28□□□□□ -1.88
CITED4Q96RK1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.28□□□□□ -1.88
CITED4Q96RK1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CITED4Q96RK1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CITED4Q96RK1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CITED4Q96RK1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CITED4Q96RK1 MIR331-201ENST00000362302 94 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 Y_RNA.586-201ENST00000391146 98 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 RNU6-257P-201ENST00000410238 98 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 RNU6-588P-201ENST00000410281 105 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 RNU2-70P-201ENST00000410718 179 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.27□□□□□ -1.89
CITED4Q96RK1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.27□□□□□ -1.89
CITED4Q96RK1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.27□□□□□ -1.89
CITED4Q96RK1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.27□□□□□ -1.89
CITED4Q96RK1 AC245102.2-201ENST00000448956 180 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 AC010401.1-201ENST00000463867 348 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 AC106707.2-201ENST00000484182 374 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 RNU6-62P-201ENST00000516526 102 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.27□□□□□ -1.89
CITED4Q96RK1 MIR378D2-201ENST00000580636 98 ntBASIC3.27□□□□□ -1.89
CITED4Q96RK1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CITED4Q96RK1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CITED4Q96RK1 AP006437.1-201ENST00000641440 3685 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
CITED4Q96RK1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CITED4Q96RK1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CITED4Q96RK1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CITED4Q96RK1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.26□□□□□ -1.89
CITED4Q96RK1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CITED4Q96RK1 SPRR2C-201ENST00000290702 219 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 MIR383-201ENST00000362257 73 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 Y_RNA.393-201ENST00000383936 102 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 SNORA8-201ENST00000384574 139 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 RNU6-959P-201ENST00000384671 107 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 RNU4-43P-201ENST00000410628 137 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 AC063976.3-201ENST00000426849 329 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 AL353689.1-201ENST00000438895 199 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.26□□□□□ -1.89
CITED4Q96RK1 AC079587.1-201ENST00000603846 277 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 AC113403.1-201ENST00000604910 193 ntBASIC3.26□□□□□ -1.89
CITED4Q96RK1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CITED4Q96RK1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CITED4Q96RK1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
CITED4Q96RK1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.25□□□□□ -1.89
CITED4Q96RK1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CITED4Q96RK1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
CITED4Q96RK1 AC073346.2-201ENST00000624724 2058 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
CITED4Q96RK1 Y_RNA.796-201ENST00000364268 102 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 SNORA73.2-201ENST00000364946 201 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 Y_RNA.799-201ENST00000364992 102 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 SNORA62.3-201ENST00000365110 153 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 RNU6-805P-201ENST00000365643 106 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 MIR554-201ENST00000384874 96 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.25□□□□□ -1.89
CITED4Q96RK1 AL109933.2-201ENST00000452651 260 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 TRBV12-2-201ENST00000489763 344 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 AC026271.5-201ENST00000577873 130 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 AL021707.8-201ENST00000609428 183 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 uc_338.13-201ENST00000618243 179 ntBASIC3.25□□□□□ -1.89
CITED4Q96RK1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CITED4Q96RK1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CITED4Q96RK1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CITED4Q96RK1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CITED4Q96RK1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CITED4Q96RK1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms