Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 SNORA63.4-201ENST00000362763 126 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 Y_RNA.114-201ENST00000363265 113 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU6-647P-201ENST00000364243 107 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 Y_RNA.796-201ENST00000364268 102 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 Y_RNA.799-201ENST00000364992 102 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 AC123900.1-201ENST00000420390 96 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 MTCO1P44-201ENST00000441935 243 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 SNORD11-201ENST00000459124 84 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 SEM1P1-201ENST00000506694 209 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 SNORA18.4-201ENST00000516440 124 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 RNA5SP164-201ENST00000516533 110 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 RMST_8.1-201ENST00000610287 165 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 AC002064.3-201ENST00000623448 346 ntBASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PCDHGA11Q9Y5H2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 Y_RNA.91-201ENST00000363042 107 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 RNA5SP443-201ENST00000363083 132 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-1138P-201ENST00000365359 106 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR520G-201ENST00000385064 90 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU1-101P-201ENST00000391171 127 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 MLLT10P1-201ENST00000418346 262 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 AC025750.2-201ENST00000442609 450 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 CYCSP35-201ENST00000451978 304 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 AL133162.1-201ENST00000463228 453 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 Y_RNA.690-201ENST00000516603 95 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU7-149P-201ENST00000516739 59 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 AL137849.1-201ENST00000604767 169 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR6500-201ENST00000622700 86 ntBASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
PCDHGA11Q9Y5H2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-743P-201ENST00000364151 106 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 FO393413.1-201ENST00000402892 195 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 AL139247.1-201ENST00000422768 325 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 ARF4P2-201ENST00000430209 526 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 AC093259.1-201ENST00000509755 300 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-365P-201ENST00000517113 106 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR2116-201ENST00000517221 80 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 AL670379.3-201ENST00000605040 251 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR378J-201ENST00000611988 109 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 U6.73-201ENST00000619194 103 ntBASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA11Q9Y5H2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 SPRR2C-201ENST00000290702 219 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 Y_RNA.280-201ENST00000364765 112 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU1-13P-201ENST00000384499 162 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR562-201ENST00000384894 95 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 MIR591-201ENST00000385290 95 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 PHBP14-201ENST00000512887 367 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 NDUFA5P6-201ENST00000542110 379 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 AL606490.9-201ENST00000603331 271 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 AL355596.1-201ENST00000565399 3996 ntBASIC3.69□□□□□ -1.82
PCDHGA11Q9Y5H2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 SNORA70.2-201ENST00000364506 135 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 CD24P4-201ENST00000382840 243 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 SNORA22-201ENST00000383907 134 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 SNORA40.5-201ENST00000391061 128 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 RNA5SP127-201ENST00000411051 133 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 Y_RNA.621-201ENST00000411065 96 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 AL117339.2-201ENST00000430475 180 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 RPS15AP28-201ENST00000435088 386 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 MTATP6P21-201ENST00000440681 189 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 AP001486.1-201ENST00000463339 476 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-589P-201ENST00000516485 107 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 RN7SKP209-201ENST00000516888 304 ntBASIC3.68□□□□□ -1.82
PCDHGA11Q9Y5H2 RNU6-1096P-201ENST00000517089 102 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms