Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU105B-201ENST00000364478 208 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU6-364P-201ENST00000384387 107 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 ARF4P2-201ENST00000430209 526 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 AC006466.1-201ENST00000438721 289 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 AC015795.1-201ENST00000513669 327 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 AL671862.1-201ENST00000515851 349 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU6-419P-201ENST00000517030 63 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 IGHV7-34-1-201ENST00000519200 350 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 IGKV1-32-201ENST00000519290 311 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 MIR548AL-201ENST00000578416 97 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 SNORA74.4-201ENST00000607595 199 ntBASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRTAP3-3Q9BYR6 AC004656.1-201ENST00000568479 4951 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 RNA5SP453-201ENST00000362503 119 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 MIR653-201ENST00000385279 96 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU6-220P-201ENST00000390919 107 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 AL645939.3-201ENST00000435408 225 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 AC090958.1-201ENST00000511122 351 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 RNA5SP43-201ENST00000516559 110 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 AL356274.2-201ENST00000624379 3752 ntBASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC2.94□□□□□ -1.94
KRTAP3-3Q9BYR6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 GGA1-205ENST00000405147 575 ntTSL 4 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 AL391987.1-201ENST00000441025 200 ntBASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 PPP1R11P1-201ENST00000486095 376 ntBASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 RNU7-13P-201ENST00000516413 62 ntBASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 SNORA31.15-201ENST00000516771 132 ntBASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 AC126177.5-201ENST00000549599 178 ntBASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 RPL10P14-201ENST00000565265 298 ntBASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 AC008608.1-201ENST00000603910 127 ntBASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
KRTAP3-3Q9BYR6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms