RNA–Protein interactions for RNA: ENST00000517030.1

RNU6-419P-201, Transcript of RNA, U6 small nuclear 419, pseudogene, humanhuman

BASIC

Gene RNU6-419P, Length 63 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-419P-201ENST00000517030 POTEDQ86YR6 584 aa6.8□□□□□ -1.32
RNU6-419P-201ENST00000517030 AEBP2Q6ZN18 517 aaPredicted RBP6.21□□□□□ -1.42
RNU6-419P-201ENST00000517030 CHIC1Q5VXU3 224 aa5.69□□□□□ -1.5
RNU6-419P-201ENST00000517030 SENP3Q9H4L4 574 aaPredicted RBP5.36□□□□□ -1.55
RNU6-419P-201ENST00000517030 PHF23Q9BUL5 403 aaPredicted RBP5.21□□□□□ -1.58
RNU6-419P-201ENST00000517030 FOXD1Q16676 465 aa5.19□□□□□ -1.58
RNU6-419P-201ENST00000517030 MSH5O43196 834 aa5.16□□□□□ -1.58
RNU6-419P-201ENST00000517030 POTEHQ6S545 545 aa5.13□□□□□ -1.59
RNU6-419P-201ENST00000517030 CACNB1Q02641 598 aaPredicted RBP5.1□□□□□ -1.59
RNU6-419P-201ENST00000517030 PLSCR2Q9NRY7 297 aa4.7□□□□□ -1.66
RNU6-419P-201ENST00000517030 PIAS4Q8N2W9 510 aaPredicted RBP4.59□□□□□ -1.67
RNU6-419P-201ENST00000517030 RNF39Q9H2S5 420 aa4.34□□□□□ -1.71
RNU6-419P-201ENST00000517030 SP7Q8TDD2 431 aaPredicted RBP4.33□□□□□ -1.72
RNU6-419P-201ENST00000517030 C1QBPQ07021 282 aaKnown RBP4.19□□□□□ -1.74
RNU6-419P-201ENST00000517030 PPP6R1Q9UPN7 881 aa4.13□□□□□ -1.75
RNU6-419P-201ENST00000517030 DMRT2Q9Y5R5 561 aa4.11□□□□□ -1.75
RNU6-419P-201ENST00000517030 DCAF8L1A6NGE4 600 aa4.06□□□□□ -1.76
RNU6-419P-201ENST00000517030 LHX8Q68G74 356 aa4.05□□□□□ -1.76
RNU6-419P-201ENST00000517030 ADRA2BP18089 450 aa4.04□□□□□ -1.76
RNU6-419P-201ENST00000517030 MAPK8IP2Q13387 824 aaPredicted RBP4.04□□□□□ -1.76
RNU6-419P-201ENST00000517030 CHRDL2Q6WN34 429 aa3.9□□□□□ -1.79
RNU6-419P-201ENST00000517030 POTEMA6NI47 508 aa3.89□□□□□ -1.79
RNU6-419P-201ENST00000517030 HAX1O00165 279 aa3.84□□□□□ -1.79
RNU6-419P-201ENST00000517030 POTEGQ6S5H5 508 aa3.83□□□□□ -1.8
RNU6-419P-201ENST00000517030 PCDH10Q9P2E7 1040 aa3.78□□□□□ -1.8
RNU6-419P-201ENST00000517030 EVX2Q03828 476 aa3.77□□□□□ -1.81
RNU6-419P-201ENST00000517030 DSG3P32926 999 aa3.76□□□□□ -1.81
RNU6-419P-201ENST00000517030 PIP4P2Q8N4L2 257 aa3.62□□□□□ -1.83
RNU6-419P-201ENST00000517030 SCAF1Q9H7N4 1312 aaKnown RBP3.6□□□□□ -1.83
RNU6-419P-201ENST00000517030 GABBR2O75899 941 aa3.57□□□□□ -1.84
RNU6-419P-201ENST00000517030 HOXD11P31277 338 aaPredicted RBP3.57□□□□□ -1.84
RNU6-419P-201ENST00000517030 DNAJC5BQ9UF47 199 aa3.56□□□□□ -1.84
RNU6-419P-201ENST00000517030 CAPN15O75808 1086 aa3.55□□□□□ -1.84
RNU6-419P-201ENST00000517030 OTUD5Q96G74 571 aa3.55□□□□□ -1.84
RNU6-419P-201ENST00000517030 RBM42Q9BTD8 480 aaKnown RBP3.54□□□□□ -1.84
RNU6-419P-201ENST00000517030 SPINK5Q9NQ38 1064 aaPredicted RBP3.54□□□□□ -1.84
RNU6-419P-201ENST00000517030 POTEIP0CG38 1075 aa3.51□□□□□ -1.85
RNU6-419P-201ENST00000517030 MMRN1Q13201 1228 aa3.48□□□□□ -1.85
RNU6-419P-201ENST00000517030 LCE2DQ5TA82 110 aaPredicted RBP3.47□□□□□ -1.85
RNU6-419P-201ENST00000517030 CDAN1Q8IWY9 1227 aa3.45□□□□□ -1.86
RNU6-419P-201ENST00000517030 ABCB7O75027 752 aa3.42□□□□□ -1.86
RNU6-419P-201ENST00000517030 FXR2P51116 673 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-419P-201ENST00000517030 PLPPR3Q6T4P5 718 aa3.42□□□□□ -1.86
RNU6-419P-201ENST00000517030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-419P-201ENST00000517030 POTEB2H3BUK9 544 aa3.4□□□□□ -1.87
RNU6-419P-201ENST00000517030 FAM163AQ96GL9 167 aaPredicted RBP3.4□□□□□ -1.87
RNU6-419P-201ENST00000517030 SPNS2Q8IVW8 549 aa3.38□□□□□ -1.87
RNU6-419P-201ENST00000517030 C19orf67A6NJJ6 358 aa3.34□□□□□ -1.87
RNU6-419P-201ENST00000517030 TRHP20396 242 aaPredicted RBP3.28□□□□□ -1.88
RNU6-419P-201ENST00000517030 REM2Q8IYK8 340 aaPredicted RBP3.28□□□□□ -1.88
RNU6-419P-201ENST00000517030 RNF216Q9NWF9 866 aaPredicted RBP3.27□□□□□ -1.89
RNU6-419P-201ENST00000517030 PITPNM1O00562 1244 aa3.26□□□□□ -1.89
RNU6-419P-201ENST00000517030 AKT1S1Q96B36 256 aa3.26□□□□□ -1.89
RNU6-419P-201ENST00000517030 DCBLD2Q96PD2 775 aa3.25□□□□□ -1.89
RNU6-419P-201ENST00000517030 U3KPZ7 1027 aaPredicted RBP3.25□□□□□ -1.89
RNU6-419P-201ENST00000517030 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
RNU6-419P-201ENST00000517030 PRKAR2AP13861 404 aaKnown RBP3.18□□□□□ -1.9
RNU6-419P-201ENST00000517030 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
RNU6-419P-201ENST00000517030 POTEJP0CG39 1038 aa3.17□□□□□ -1.9
RNU6-419P-201ENST00000517030 ZNF219Q9P2Y4 722 aaPredicted RBP3.15□□□□□ -1.91
RNU6-419P-201ENST00000517030 MAMSTRQ6ZN01 415 aa3.07□□□□□ -1.92
RNU6-419P-201ENST00000517030 ST18O60284 1047 aa3.05□□□□□ -1.92
RNU6-419P-201ENST00000517030 CLCN6P51797 869 aa3.05□□□□□ -1.92
RNU6-419P-201ENST00000517030 CNKSR2Q8WXI2 1034 aa3.05□□□□□ -1.92
RNU6-419P-201ENST00000517030 SCUBE2Q9NQ36 999 aa3.04□□□□□ -1.92
RNU6-419P-201ENST00000517030 PELP1Q8IZL8 1130 aaKnown RBP3.02□□□□□ -1.93
RNU6-419P-201ENST00000517030 CD44P16070 742 aaKnown RBP3□□□□□ -1.93
RNU6-419P-201ENST00000517030 GALR2O43603 387 aaPredicted RBP2.98□□□□□ -1.93
RNU6-419P-201ENST00000517030 CHADLQ6NUI6 762 aa2.98□□□□□ -1.93
RNU6-419P-201ENST00000517030 METRNQ9UJH8 293 aa2.97□□□□□ -1.93
RNU6-419P-201ENST00000517030 POLA2Q14181 598 aa2.95□□□□□ -1.94
RNU6-419P-201ENST00000517030 KRTAP3-3Q9BYR6 98 aa2.95□□□□□ -1.94
RNU6-419P-201ENST00000517030 KRTAP3-2Q9BYR7 98 aa2.95□□□□□ -1.94
RNU6-419P-201ENST00000517030 APLP2Q06481 763 aa2.94□□□□□ -1.94
RNU6-419P-201ENST00000517030 RNF166Q96A37 237 aaPredicted RBP2.93□□□□□ -1.94
RNU6-419P-201ENST00000517030 PPP4R3CPQ6ZMV5 832 aa2.91□□□□□ -1.94
RNU6-419P-201ENST00000517030 MARVELD3Q96A59 401 aa2.91□□□□□ -1.94
RNU6-419P-201ENST00000517030 CLEC11AQ9Y240 323 aa2.91□□□□□ -1.94
RNU6-419P-201ENST00000517030 OSCARQ8IYS5 282 aa2.89□□□□□ -1.95
RNU6-419P-201ENST00000517030 C7P10643 843 aa2.88□□□□□ -1.95
RNU6-419P-201ENST00000517030 ZNF579Q8NAF0 562 aaKnown RBP2.87□□□□□ -1.95
RNU6-419P-201ENST00000517030 SLC39A7Q92504 469 aa2.87□□□□□ -1.95
RNU6-419P-201ENST00000517030 IRX2Q9BZI1 471 aaPredicted RBP2.85□□□□□ -1.95
RNU6-419P-201ENST00000517030 POTEB3A0JP26 581 aa2.84□□□□□ -1.95
RNU6-419P-201ENST00000517030 POTEBQ6S5H4 581 aa2.84□□□□□ -1.95
RNU6-419P-201ENST00000517030 TMEM121BQ9BXQ6 578 aaPredicted RBP2.84□□□□□ -1.95
RNU6-419P-201ENST00000517030 ZRANB1Q9UGI0 708 aa2.82□□□□□ -1.96
RNU6-419P-201ENST00000517030 POTEFA5A3E0 1075 aa2.81□□□□□ -1.96
RNU6-419P-201ENST00000517030 PLA2G2EQ9NZK7 142 aa2.81□□□□□ -1.96
RNU6-419P-201ENST00000517030 MYT1LQ9UL68 1186 aa2.8□□□□□ -1.96
RNU6-419P-201ENST00000517030 ASTLQ6HA08 431 aaPredicted RBP2.79□□□□□ -1.96
RNU6-419P-201ENST00000517030 SLAIN1Q8ND83 568 aa2.79□□□□□ -1.96
RNU6-419P-201ENST00000517030 HS3ST6Q96QI5 342 aa2.79□□□□□ -1.96
RNU6-419P-201ENST00000517030 ATMINO43313 823 aaPredicted RBP2.78□□□□□ -1.96
RNU6-419P-201ENST00000517030 SUZ12Q15022 739 aaKnown RBP2.77□□□□□ -1.97
RNU6-419P-201ENST00000517030 SPDYE1Q8NFV5 336 aaPredicted RBP2.77□□□□□ -1.97
RNU6-419P-201ENST00000517030 FAM205CA6NFA0 338 aa2.76□□□□□ -1.97
RNU6-419P-201ENST00000517030 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
RNU6-419P-201ENST00000517030 KRTAP1-3Q8IUG1 177 aa2.76□□□□□ -1.97
RNU6-419P-201ENST00000517030 FARP1Q9Y4F1 1045 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms