Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 AC010598.1-201ENST00000510378 103 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 RNU6-240P-201ENST00000516098 97 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 RNU6-504P-201ENST00000516568 104 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 RNY4P20-201ENST00000516678 93 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 DEFB131E-201ENST00000532329 154 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 MIR4458-201ENST00000578872 75 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 MIR4662A-201ENST00000637499 67 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 AL133412.1-201ENST00000380194 2992 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 RNY3P2-201ENST00000362918 102 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 RNU6-1209P-201ENST00000363655 107 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 AL353689.1-201ENST00000438895 199 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 SNORD65B-201ENST00000459126 73 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 RPL23AP67-201ENST00000465341 474 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 RPS26P48-201ENST00000491713 339 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 RNA5SP20-201ENST00000515976 84 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 AC010733.2-201ENST00000589496 5702 ntBASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL25A1Q9BXS0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 MIR422A-201ENST00000362286 90 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 RNU4-35P-201ENST00000362588 141 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 RNU4-13P-201ENST00000364019 141 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 RNU4-36P-201ENST00000364294 144 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 RNU6-776P-201ENST00000364403 104 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 RNU6-1022P-201ENST00000365049 104 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 RNU6-1240P-201ENST00000365155 104 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 MIR759-201ENST00000390224 91 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 MIR708-201ENST00000390708 88 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 AL603825.1-201ENST00000438481 80 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 HMGN2P9-201ENST00000476875 229 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 RNU6-1018P-201ENST00000516577 106 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 RNU7-143P-201ENST00000516781 65 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 MIR5588-201ENST00000581890 63 ntBASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL25A1Q9BXS0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 SNORA51.4-201ENST00000364993 124 ntBASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 SNORA1.3-201ENST00000384676 136 ntBASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 CKS1BP6-201ENST00000424932 240 ntBASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 RNU7-171P-201ENST00000459581 62 ntBASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 AL162726.3-218ENST00000636401 95 ntBASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
COL25A1Q9BXS0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 RNU6-117P-201ENST00000365415 107 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 MIR181A2-201ENST00000384863 110 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 MIR548D2-201ENST00000384955 97 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 MIR493-201ENST00000385254 89 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 AL451046.2-201ENST00000403074 277 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 AC063976.3-201ENST00000426849 329 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 RPS3P1-201ENST00000456781 192 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 AC080013.2-201ENST00000460866 323 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 RNU7-61P-201ENST00000515897 61 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 RNA5SP356-201ENST00000515972 94 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 RNA5SP164-201ENST00000516533 110 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 HSPE1P7-201ENST00000604681 321 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 MIR7851-201ENST00000610611 160 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL25A1Q9BXS0 AC000403.1-201ENST00000613696 3585 ntBASIC3.84□□□□□ -1.8
COL25A1Q9BXS0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
COL25A1Q9BXS0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms