Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 CR392000.1-201ENST00000624770 1228 ntBASIC14.44□□□□□ -0.1
U3KQE9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.44□□□□□ -0.1
U3KQE9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
U3KQE9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
U3KQE9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
U3KQE9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
U3KQE9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.44□□□□□ -0.1
U3KQE9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.43□□□□□ -0.1
U3KQE9 AL135905.2-201ENST00000584934 1404 ntBASIC14.43□□□□□ -0.1
U3KQE9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
U3KQE9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
U3KQE9 KRT18P29-201ENST00000397031 1267 ntBASIC14.43□□□□□ -0.1
U3KQE9 AC008040.2-201ENST00000461049 708 ntBASIC14.43□□□□□ -0.1
U3KQE9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.43□□□□□ -0.1
U3KQE9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.43□□□□□ -0.1
U3KQE9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.43□□□□□ -0.1
U3KQE9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.43□□□□□ -0.1
U3KQE9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.43□□□□□ -0.1
U3KQE9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.43□□□□□ -0.1
U3KQE9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.43□□□□□ -0.1
U3KQE9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
U3KQE9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
U3KQE9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
U3KQE9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.42□□□□□ -0.1
U3KQE9 HEIH-201ENST00000623091 1652 ntBASIC14.42□□□□□ -0.1
U3KQE9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 ANO7L1-203ENST00000602586 1720 ntBASIC14.42□□□□□ -0.1
U3KQE9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 PRORSD1P-201ENST00000295112 541 ntBASIC14.42□□□□□ -0.1
U3KQE9 AC011506.1-201ENST00000474329 610 ntBASIC14.42□□□□□ -0.1
U3KQE9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.42□□□□□ -0.1
U3KQE9 AC011298.2-201ENST00000617989 482 ntBASIC14.42□□□□□ -0.1
U3KQE9 FAM197Y4-202ENST00000622692 608 ntBASIC14.42□□□□□ -0.1
U3KQE9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
U3KQE9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.42□□□□□ -0.1
U3KQE9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.42□□□□□ -0.1
U3KQE9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 KRT8P32-201ENST00000512863 1461 ntBASIC14.42□□□□□ -0.1
U3KQE9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.42□□□□□ -0.1
U3KQE9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
U3KQE9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
U3KQE9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U3KQE9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
U3KQE9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
U3KQE9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.41□□□□□ -0.1
U3KQE9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
U3KQE9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
U3KQE9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.41□□□□□ -0.1
U3KQE9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.41□□□□□ -0.1
U3KQE9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U3KQE9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.41□□□□□ -0.1
U3KQE9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U3KQE9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
U3KQE9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
U3KQE9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
U3KQE9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms