Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 AC005829.2-201ENST00000571422 1056 ntBASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.14■□□□□ 0.5
AP4B1Q9Y6B7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AP4B1Q9Y6B7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.14■□□□□ 0.5
AP4B1Q9Y6B7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.14■□□□□ 0.5
AP4B1Q9Y6B7 PRORSD1P-202ENST00000563365 2154 ntBASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.14■□□□□ 0.49
AP4B1Q9Y6B7 AC099398.1-201ENST00000567919 2776 ntBASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 FAM201B-201ENST00000458407 597 ntBASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 AL512353.2-201ENST00000448759 1962 ntBASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.13■□□□□ 0.49
AP4B1Q9Y6B7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP4B1Q9Y6B7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms