Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 NTF6B-201ENST00000591913 560 ntBASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 HCG11-201ENST00000411553 5696 ntBASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA4Q9Y5G9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 KRT16P1-201ENST00000399124 1418 ntBASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA4Q9Y5G9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHGA4Q9Y5G9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA4Q9Y5G9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA4Q9Y5G9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA4Q9Y5G9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.64■□□□□ 0.58
PCDHGA4Q9Y5G9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA4Q9Y5G9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 AC004408.2-201ENST00000623613 2777 ntBASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 AC087388.1-201ENST00000571370 1112 ntBASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA4Q9Y5G9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms