Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 INGX-201ENST00000359239 846 ntBASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 Z85996.1-201ENST00000494644 937 ntBASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 WWOX-216ENST00000569818 525 ntBASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA6Q9Y5G7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 AP001271.2-201ENST00000624018 1556 ntBASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 AC091390.4-202ENST00000476426 537 ntBASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 LINC01238-205ENST00000567549 1107 ntBASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA6Q9Y5G7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 AK4P3-201ENST00000418260 669 ntBASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 AC087388.1-201ENST00000571370 1112 ntBASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA6Q9Y5G7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 AC063952.2-201ENST00000498792 1227 ntBASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 AL138966.2-201ENST00000621997 464 ntBASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA6Q9Y5G7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA6Q9Y5G7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA6Q9Y5G7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms