Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 AC120498.8-201ENST00000614275 531 ntBASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 AC005332.8-201ENST00000622750 2735 ntBASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 AP001412.1-201ENST00000608405 714 ntBASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 AL023875.1-201ENST00000640777 796 ntBASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 NOC2LP1-202ENST00000452600 2235 ntBASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LSM4Q9Y4Z0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 TSPY7P-201ENST00000431358 1114 ntBASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 AL135905.2-201ENST00000584934 1404 ntBASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 AL049637.2-201ENST00000641778 930 ntBASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LSM4Q9Y4Z0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms