Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ZC3H4Q9UPT8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 AC005332.3-201ENST00000589904 676 ntBASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ZC3H4Q9UPT8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 VENTXP7-201ENST00000475503 772 ntBASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 AC140113.2-201ENST00000604370 208 ntBASIC22.89■■□□□ 1.26
ZC3H4Q9UPT8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
ZC3H4Q9UPT8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
ZC3H4Q9UPT8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ZC3H4Q9UPT8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.89■■□□□ 1.25
ZC3H4Q9UPT8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ZC3H4Q9UPT8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
ZC3H4Q9UPT8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ZC3H4Q9UPT8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.89■■□□□ 1.25
ZC3H4Q9UPT8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 PMS2P2-201ENST00000425039 1128 ntBASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 MCCD1P1-208ENST00000445732 328 ntBASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 AL691403.2-201ENST00000618460 490 ntBASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 AC243591.1-201ENST00000452967 1364 ntBASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ZC3H4Q9UPT8 AC092667.1-201ENST00000434301 2586 ntBASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 EMD-201ENST00000369835 966 ntTSL 3 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 NSUN5P1-202ENST00000421140 1535 ntBASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 NSUN5P2-203ENST00000457352 1529 ntBASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 AC007225.1-201ENST00000566331 1836 ntBASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ZC3H4Q9UPT8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 AP003733.1-201ENST00000491725 852 ntBASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 ZNF259P1-201ENST00000407656 1365 ntBASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.86■■□□□ 1.25
ZC3H4Q9UPT8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms