Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 PRKY-204ENST00000533551 1019 ntBASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 FAM197Y4-202ENST00000622692 608 ntBASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 PRORSD1P-202ENST00000563365 2154 ntBASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT11Q9UKZ1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 UBE2SP1-201ENST00000450587 669 ntBASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CNOT11Q9UKZ1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNOT11Q9UKZ1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 AC110285.5-201ENST00000611501 352 ntBASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 AC067852.2-201ENST00000590513 2313 ntBASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT11Q9UKZ1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms