Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 AC093458.2-201ENST00000623150 629 ntBASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 AC116407.4-201ENST00000623319 1061 ntBASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 KRT8P3-201ENST00000519669 1449 ntBASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 MCCD1P1-208ENST00000445732 328 ntBASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 AC083849.1-201ENST00000615227 514 ntBASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 HYMAI.1-201ENST00000620949 238 ntBASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 AC036111.1-201ENST00000533973 1582 ntBASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRIT1Q9P2V4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 AC034232.1-201ENST00000506026 1064 ntBASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 MIR3180-5-201ENST00000583743 153 ntBASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 AC024243.1-201ENST00000609234 778 ntBASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.27■□□□□ 0.52
LRIT1Q9P2V4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRIT1Q9P2V4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRIT1Q9P2V4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.27■□□□□ 0.51
LRIT1Q9P2V4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRIT1Q9P2V4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.27■□□□□ 0.51
LRIT1Q9P2V4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.27■□□□□ 0.51
LRIT1Q9P2V4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRIT1Q9P2V4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRIT1Q9P2V4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 AC125437.2-201ENST00000625180 2167 ntBASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRIT1Q9P2V4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms