Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.64■□□□□ 0.41
RLIMQ9NVW2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 MIR4651-201ENST00000582622 73 ntBASIC17.64■□□□□ 0.41
RLIMQ9NVW2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 AC073648.6-201ENST00000641589 218 ntBASIC17.64■□□□□ 0.41
RLIMQ9NVW2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 AC006058.3-201ENST00000606217 1069 ntBASIC17.63■□□□□ 0.41
RLIMQ9NVW2 AC124016.1-201ENST00000609552 612 ntBASIC17.63■□□□□ 0.41
RLIMQ9NVW2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RLIMQ9NVW2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 FEM1AP3-201ENST00000403722 1741 ntBASIC17.62■□□□□ 0.41
RLIMQ9NVW2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 CD99P1-205ENST00000527459 561 ntBASIC17.62■□□□□ 0.41
RLIMQ9NVW2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 AL160286.2-201ENST00000567150 934 ntBASIC17.62■□□□□ 0.41
RLIMQ9NVW2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 RN7SL471P-201ENST00000580476 299 ntBASIC17.62■□□□□ 0.41
RLIMQ9NVW2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 AC079598.2-202ENST00000546624 1451 ntBASIC17.62■□□□□ 0.41
RLIMQ9NVW2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.62■□□□□ 0.41
RLIMQ9NVW2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RLIMQ9NVW2 AL354751.1-201ENST00000412768 1863 ntBASIC17.61■□□□□ 0.41
RLIMQ9NVW2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms