Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC254562.1-201ENST00000417586 456 ntBASIC17.61■□□□□ 0.41
CHD8Q9HCK8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 TREX1-205ENST00000625293 1783 ntBASIC17.61■□□□□ 0.41
CHD8Q9HCK8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 AC093028.1-201ENST00000622998 982 ntBASIC17.61■□□□□ 0.41
CHD8Q9HCK8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.61■□□□□ 0.41
CHD8Q9HCK8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 MCCD1P2-201ENST00000423228 335 ntBASIC17.6■□□□□ 0.41
CHD8Q9HCK8 AC007967.2-201ENST00000432613 625 ntBASIC17.6■□□□□ 0.41
CHD8Q9HCK8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 SMG8-203ENST00000578922 2178 ntBASIC17.6■□□□□ 0.41
CHD8Q9HCK8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.6■□□□□ 0.41
CHD8Q9HCK8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD8Q9HCK8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 FGFR3P6-201ENST00000457012 610 ntBASIC17.59■□□□□ 0.41
CHD8Q9HCK8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 RNA5SP416-201ENST00000516838 111 ntBASIC17.59■□□□□ 0.41
CHD8Q9HCK8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 AC005225.4-201ENST00000557330 545 ntBASIC17.59■□□□□ 0.41
CHD8Q9HCK8 AC138761.1-201ENST00000584393 385 ntBASIC17.59■□□□□ 0.41
CHD8Q9HCK8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD8Q9HCK8 AIRN-201ENST00000601203 4374 ntBASIC17.59■□□□□ 0.41
CHD8Q9HCK8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.58■□□□□ 0.41
CHD8Q9HCK8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHD8Q9HCK8 POM121L3P-201ENST00000419331 1163 ntBASIC17.58■□□□□ 0.4
CHD8Q9HCK8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD8Q9HCK8 ALG1L5P-201ENST00000482043 771 ntBASIC17.58■□□□□ 0.4
CHD8Q9HCK8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.58■□□□□ 0.4
CHD8Q9HCK8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.58■□□□□ 0.4
CHD8Q9HCK8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.57■□□□□ 0.4
CHD8Q9HCK8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms