Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 NIFKP9-201ENST00000419265 221 ntBASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 AF186192.3-201ENST00000583427 947 ntBASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 AL445675.2-201ENST00000620291 557 ntBASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AC135050.7-201ENST00000624508 2218 ntBASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AC104581.1-202ENST00000635932 2618 ntBASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLK4Q9HAZ1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 AC009113.1-201ENST00000570267 2443 ntBASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLK4Q9HAZ1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLK4Q9HAZ1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.39■□□□□ 0.54
CLK4Q9HAZ1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLK4Q9HAZ1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.39■□□□□ 0.54
CLK4Q9HAZ1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
CLK4Q9HAZ1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLK4Q9HAZ1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms