Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRRC40Q9H9A6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC40Q9H9A6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 AC142381.4-202ENST00000563973 229 ntBASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 AC011298.2-201ENST00000617989 482 ntBASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC40Q9H9A6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
LRRC40Q9H9A6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
LRRC40Q9H9A6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LRRC40Q9H9A6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 AC020763.4-201ENST00000623414 4170 ntBASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRRC40Q9H9A6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms