Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 SPDYE15P-201ENST00000424157 909 ntBASIC20.45■□□□□ 0.86
NXF3Q9H4D5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NXF3Q9H4D5 AL512353.2-201ENST00000448759 1962 ntBASIC20.45■□□□□ 0.86
NXF3Q9H4D5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.44■□□□□ 0.86
NXF3Q9H4D5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 RCC2P3-201ENST00000418112 1537 ntBASIC20.44■□□□□ 0.86
NXF3Q9H4D5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NXF3Q9H4D5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 FP475955.4-201ENST00000623131 1990 ntBASIC20.43■□□□□ 0.86
NXF3Q9H4D5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.43■□□□□ 0.86
NXF3Q9H4D5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 STARP1-201ENST00000397973 869 ntBASIC20.42■□□□□ 0.86
NXF3Q9H4D5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 AC112907.2-201ENST00000448639 330 ntBASIC20.42■□□□□ 0.86
NXF3Q9H4D5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 AC024243.1-201ENST00000609234 778 ntBASIC20.42■□□□□ 0.86
NXF3Q9H4D5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NXF3Q9H4D5 AC008556.1-201ENST00000610908 2040 ntBASIC20.41■□□□□ 0.86
NXF3Q9H4D5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NXF3Q9H4D5 FAM86EP-206ENST00000510506 987 ntBASIC20.41■□□□□ 0.86
NXF3Q9H4D5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms