Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 ABHD17AP1-201ENST00000358206 933 ntBASIC23.88■■□□□ 1.41
CHMP4BQ9H444 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 AC116562.2-201ENST00000507042 360 ntBASIC23.88■■□□□ 1.41
CHMP4BQ9H444 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHMP4BQ9H444 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 AL512353.2-201ENST00000448759 1962 ntBASIC23.87■■□□□ 1.41
CHMP4BQ9H444 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CHMP4BQ9H444 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 NUDT16P1-203ENST00000513809 620 ntBASIC23.86■■□□□ 1.41
CHMP4BQ9H444 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.86■■□□□ 1.41
CHMP4BQ9H444 AL020996.1-203ENST00000536896 2307 ntBASIC23.85■■□□□ 1.41
CHMP4BQ9H444 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 AC008040.2-201ENST00000461049 708 ntBASIC23.85■■□□□ 1.41
CHMP4BQ9H444 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 HEIH-201ENST00000623091 1652 ntBASIC23.85■■□□□ 1.41
CHMP4BQ9H444 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHMP4BQ9H444 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 KRT8P32-201ENST00000512863 1461 ntBASIC23.84■■□□□ 1.41
CHMP4BQ9H444 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 AL049637.2-201ENST00000641778 930 ntBASIC23.84■■□□□ 1.41
CHMP4BQ9H444 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.84■■□□□ 1.41
CHMP4BQ9H444 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHMP4BQ9H444 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHMP4BQ9H444 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHMP4BQ9H444 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CHMP4BQ9H444 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms