Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.73■□□□□ 0.75
DDX47Q9H0S4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 AC073592.3-201ENST00000625118 1834 ntBASIC19.73■□□□□ 0.75
DDX47Q9H0S4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 AP000997.3-201ENST00000623333 2250 ntBASIC19.73■□□□□ 0.75
DDX47Q9H0S4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
DDX47Q9H0S4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.71■□□□□ 0.75
DDX47Q9H0S4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.71■□□□□ 0.75
DDX47Q9H0S4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX47Q9H0S4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 AC083906.2-201ENST00000511578 360 ntBASIC19.7■□□□□ 0.74
DDX47Q9H0S4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
DDX47Q9H0S4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX47Q9H0S4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms