Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RPAP1Q9BWH6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 TSPY5P-201ENST00000426936 936 ntBASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RPAP1Q9BWH6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 UPK3BP1-201ENST00000428678 509 ntBASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 CKBP1-201ENST00000565489 1086 ntBASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPAP1Q9BWH6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 AC092647.4-201ENST00000457211 535 ntBASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 AC008622.2-201ENST00000617006 1229 ntBASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
RPAP1Q9BWH6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
RPAP1Q9BWH6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
RPAP1Q9BWH6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 AL121956.5-201ENST00000625261 221 ntBASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 AL161938.1-201ENST00000569833 2180 ntBASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
RPAP1Q9BWH6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.94■■□□□ 1.26
RPAP1Q9BWH6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms