Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM62Q9BVG3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 AL512353.2-201ENST00000448759 1962 ntBASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 AC211429.1-201ENST00000415277 523 ntBASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
TRIM62Q9BVG3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 MCCD1P1-208ENST00000445732 328 ntBASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 KRT8P32-201ENST00000512863 1461 ntBASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM62Q9BVG3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 FAM87A-204ENST00000613235 858 ntBASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 AC083906.6-201ENST00000641366 219 ntBASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM62Q9BVG3 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 AL109659.2-201ENST00000606809 1674 ntBASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 AC005363.2-201ENST00000618631 242 ntBASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM62Q9BVG3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms