Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHRDL1Q9BU40 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CHRDL1Q9BU40 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHRDL1Q9BU40 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHRDL1Q9BU40 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CHRDL1Q9BU40 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CHRDL1Q9BU40 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CHRDL1Q9BU40 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHRDL1Q9BU40 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHRDL1Q9BU40 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CHRDL1Q9BU40 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.04■□□□□ -0
CHRDL1Q9BU40 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHRDL1Q9BU40 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 AC233263.1-201ENST00000578059 224 ntBASIC15.03■□□□□ -0
CHRDL1Q9BU40 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.03■□□□□ -0
CHRDL1Q9BU40 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRDL1Q9BU40 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CHRDL1Q9BU40 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 KRT17P3-201ENST00000420566 1262 ntBASIC15.02■□□□□ -0
CHRDL1Q9BU40 TUBB8P6-201ENST00000436895 1288 ntBASIC15.02■□□□□ -0
CHRDL1Q9BU40 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRDL1Q9BU40 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 PRKY-204ENST00000533551 1019 ntBASIC15.02■□□□□ -0
CHRDL1Q9BU40 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.02■□□□□ -0
CHRDL1Q9BU40 AC069544.1-201ENST00000609399 999 ntBASIC15.02■□□□□ -0
CHRDL1Q9BU40 AC020916.1-201ENST00000587762 1774 ntBASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.02□□□□□ -0.01
CHRDL1Q9BU40 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRDL1Q9BU40 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms