Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.87■□□□□ 0.29
USB1Q9BQ65 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USB1Q9BQ65 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 AL512604.3-201ENST00000569583 964 ntBASIC16.86■□□□□ 0.29
USB1Q9BQ65 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 RN7SL832P-201ENST00000607781 1756 ntBASIC16.86■□□□□ 0.29
USB1Q9BQ65 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USB1Q9BQ65 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
USB1Q9BQ65 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 AC091390.4-202ENST00000476426 537 ntBASIC16.85■□□□□ 0.29
USB1Q9BQ65 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 PRSS44-201ENST00000515154 1146 ntBASIC16.85■□□□□ 0.29
USB1Q9BQ65 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 AC010947.1-201ENST00000623454 693 ntBASIC16.85■□□□□ 0.29
USB1Q9BQ65 AC116562.4-202ENST00000641738 218 ntBASIC16.85■□□□□ 0.29
USB1Q9BQ65 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
USB1Q9BQ65 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USB1Q9BQ65 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 TCF3P1-201ENST00000423021 1937 ntBASIC16.84■□□□□ 0.29
USB1Q9BQ65 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms