Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL1Q99990 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL1Q99990 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VGLL1Q99990 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VGLL1Q99990 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
VGLL1Q99990 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VGLL1Q99990 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VGLL1Q99990 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL1Q99990 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL1Q99990 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 NFIC-211ENST00000641145 8399 ntBASIC14.35□□□□□ -0.11
VGLL1Q99990 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
VGLL1Q99990 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VGLL1Q99990 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.35□□□□□ -0.11
VGLL1Q99990 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL1Q99990 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL1Q99990 TUBB8P6-201ENST00000436895 1288 ntBASIC14.35□□□□□ -0.11
VGLL1Q99990 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL1Q99990 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL1Q99990 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL1Q99990 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL1Q99990 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL1Q99990 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
VGLL1Q99990 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL1Q99990 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VGLL1Q99990 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL1Q99990 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VGLL1Q99990 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
VGLL1Q99990 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.34□□□□□ -0.11
VGLL1Q99990 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VGLL1Q99990 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.34□□□□□ -0.11
VGLL1Q99990 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.34□□□□□ -0.11
VGLL1Q99990 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
VGLL1Q99990 SLC29A4P1-201ENST00000398760 971 ntBASIC14.34□□□□□ -0.11
VGLL1Q99990 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.34□□□□□ -0.11
VGLL1Q99990 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.34□□□□□ -0.11
VGLL1Q99990 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.34□□□□□ -0.11
VGLL1Q99990 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.34□□□□□ -0.11
VGLL1Q99990 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.34□□□□□ -0.11
VGLL1Q99990 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.34□□□□□ -0.11
VGLL1Q99990 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.34□□□□□ -0.11
VGLL1Q99990 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.34□□□□□ -0.11
VGLL1Q99990 HLA-B-256ENST00000639848 1089 ntBASIC14.34□□□□□ -0.11
VGLL1Q99990 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VGLL1Q99990 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VGLL1Q99990 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.33□□□□□ -0.11
VGLL1Q99990 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.33□□□□□ -0.11
VGLL1Q99990 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 AC079598.2-202ENST00000546624 1451 ntBASIC14.33□□□□□ -0.12
VGLL1Q99990 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VGLL1Q99990 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.33□□□□□ -0.12
VGLL1Q99990 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.33□□□□□ -0.12
VGLL1Q99990 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms