Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.6□□□□□ -0.39
LITAFQ99732 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.6□□□□□ -0.39
LITAFQ99732 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LITAFQ99732 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 AC022211.2-201ENST00000585075 2527 ntBASIC12.6□□□□□ -0.39
LITAFQ99732 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
LITAFQ99732 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LITAFQ99732 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LITAFQ99732 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LITAFQ99732 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
LITAFQ99732 AL356441.2-201ENST00000443009 864 ntBASIC12.6□□□□□ -0.39
LITAFQ99732 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.6□□□□□ -0.39
LITAFQ99732 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.6□□□□□ -0.39
LITAFQ99732 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC12.6□□□□□ -0.39
LITAFQ99732 AC016405.3-201ENST00000607710 860 ntBASIC12.6□□□□□ -0.39
LITAFQ99732 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.6□□□□□ -0.39
LITAFQ99732 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.6□□□□□ -0.39
LITAFQ99732 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LITAFQ99732 NKILA-202ENST00000614771 2598 ntBASIC12.6□□□□□ -0.39
LITAFQ99732 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LITAFQ99732 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LITAFQ99732 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.6□□□□□ -0.39
LITAFQ99732 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
LITAFQ99732 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LITAFQ99732 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
LITAFQ99732 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 AL499627.1-201ENST00000569373 2188 ntBASIC12.59□□□□□ -0.39
LITAFQ99732 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.59□□□□□ -0.39
LITAFQ99732 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.59□□□□□ -0.39
LITAFQ99732 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 AL162412.1-201ENST00000567129 965 ntBASIC12.59□□□□□ -0.39
LITAFQ99732 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC12.59□□□□□ -0.39
LITAFQ99732 AC100791.3-201ENST00000617619 330 ntBASIC12.59□□□□□ -0.39
LITAFQ99732 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LITAFQ99732 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.59□□□□□ -0.39
LITAFQ99732 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.59□□□□□ -0.39
LITAFQ99732 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LITAFQ99732 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LITAFQ99732 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LITAFQ99732 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.58□□□□□ -0.39
LITAFQ99732 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
LITAFQ99732 AC011676.5-201ENST00000624864 2660 ntBASIC12.58□□□□□ -0.4
LITAFQ99732 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.58□□□□□ -0.4
LITAFQ99732 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.58□□□□□ -0.4
LITAFQ99732 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.58□□□□□ -0.4
LITAFQ99732 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LITAFQ99732 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.58□□□□□ -0.4
LITAFQ99732 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC12.58□□□□□ -0.4
LITAFQ99732 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms