Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SCAF11Q99590 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SCAF11Q99590 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF11Q99590 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF11Q99590 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC27.16■■□□□ 1.94
SCAF11Q99590 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF11Q99590 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC27.16■■□□□ 1.94
SCAF11Q99590 KRT18P13-201ENST00000400056 1290 ntBASIC27.16■■□□□ 1.94
SCAF11Q99590 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCAF11Q99590 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC27.16■■□□□ 1.94
SCAF11Q99590 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC27.16■■□□□ 1.94
SCAF11Q99590 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC27.16■■□□□ 1.94
SCAF11Q99590 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC27.16■■□□□ 1.94
SCAF11Q99590 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC27.16■■□□□ 1.94
SCAF11Q99590 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SCAF11Q99590 AL353801.3-201ENST00000609898 542 ntBASIC27.16■■□□□ 1.94
SCAF11Q99590 AC117500.6-201ENST00000624871 588 ntBASIC27.16■■□□□ 1.94
SCAF11Q99590 MED17-221ENST00000639724 2317 ntTSL 5 BASIC27.16■■□□□ 1.94
SCAF11Q99590 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
SCAF11Q99590 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC27.15■■□□□ 1.94
SCAF11Q99590 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF11Q99590 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC27.15■■□□□ 1.94
SCAF11Q99590 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF11Q99590 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC27.15■■□□□ 1.94
SCAF11Q99590 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
SCAF11Q99590 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC27.15■■□□□ 1.94
SCAF11Q99590 AC104819.1-201ENST00000504587 486 ntBASIC27.15■■□□□ 1.94
SCAF11Q99590 MIR3917-201ENST00000580971 93 ntBASIC27.15■■□□□ 1.94
SCAF11Q99590 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC27.15■■□□□ 1.94
SCAF11Q99590 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF11Q99590 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF11Q99590 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF11Q99590 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
SCAF11Q99590 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCAF11Q99590 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC27.15■■□□□ 1.94
SCAF11Q99590 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC27.14■■□□□ 1.94
SCAF11Q99590 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC27.14■■□□□ 1.94
SCAF11Q99590 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
SCAF11Q99590 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 RNA5SP419-201ENST00000515908 135 ntBASIC27.14■■□□□ 1.94
SCAF11Q99590 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC27.14■■□□□ 1.94
SCAF11Q99590 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC27.14■■□□□ 1.94
SCAF11Q99590 MIR3180-5-201ENST00000583743 153 ntBASIC27.14■■□□□ 1.94
SCAF11Q99590 NME4-212ENST00000621774 904 ntTSL 3 BASIC27.14■■□□□ 1.94
SCAF11Q99590 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC27.14■■□□□ 1.94
SCAF11Q99590 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC27.14■■□□□ 1.94
SCAF11Q99590 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC27.14■■□□□ 1.94
SCAF11Q99590 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC27.14■■□□□ 1.94
SCAF11Q99590 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC27.14■■□□□ 1.94
SCAF11Q99590 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCAF11Q99590 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC27.14■■□□□ 1.93
SCAF11Q99590 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SCAF11Q99590 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
SCAF11Q99590 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF11Q99590 BAALC-202ENST00000306391 243 ntTSL 5 BASIC27.13■■□□□ 1.93
SCAF11Q99590 BAALC-204ENST00000330955 222 ntTSL 5 BASIC27.13■■□□□ 1.93
SCAF11Q99590 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC27.13■■□□□ 1.93
SCAF11Q99590 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
SCAF11Q99590 AL023284.2-201ENST00000405850 579 ntBASIC27.13■■□□□ 1.93
SCAF11Q99590 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC27.13■■□□□ 1.93
SCAF11Q99590 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC27.13■■□□□ 1.93
SCAF11Q99590 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC27.13■■□□□ 1.93
SCAF11Q99590 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC27.13■■□□□ 1.93
SCAF11Q99590 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
SCAF11Q99590 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF11Q99590 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC27.13■■□□□ 1.93
SCAF11Q99590 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF11Q99590 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC27.13■■□□□ 1.93
SCAF11Q99590 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF11Q99590 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC27.13■■□□□ 1.93
SCAF11Q99590 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF11Q99590 RPP21-221ENST00000428040 594 ntTSL 2 BASIC27.13■■□□□ 1.93
SCAF11Q99590 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC27.13■■□□□ 1.93
SCAF11Q99590 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF11Q99590 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF11Q99590 AC074051.2-201ENST00000565115 352 ntBASIC27.13■■□□□ 1.93
SCAF11Q99590 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SCAF11Q99590 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF11Q99590 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF11Q99590 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.12■■□□□ 1.93
SCAF11Q99590 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF11Q99590 UBC-206ENST00000538617 1303 ntTSL 5 BASIC27.12■■□□□ 1.93
SCAF11Q99590 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SCAF11Q99590 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SCAF11Q99590 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms