Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TWNKQ96RR1 AL023284.2-201ENST00000405850 579 ntBASIC20.08■□□□□ 0.81
TWNKQ96RR1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TWNKQ96RR1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TWNKQ96RR1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TWNKQ96RR1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.08■□□□□ 0.81
TWNKQ96RR1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.08■□□□□ 0.81
TWNKQ96RR1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TWNKQ96RR1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TWNKQ96RR1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.08■□□□□ 0.8
TWNKQ96RR1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.08■□□□□ 0.8
TWNKQ96RR1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
TWNKQ96RR1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
TWNKQ96RR1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TWNKQ96RR1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TWNKQ96RR1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.08■□□□□ 0.8
TWNKQ96RR1 AC018445.3-201ENST00000624177 1945 ntBASIC20.08■□□□□ 0.8
TWNKQ96RR1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TWNKQ96RR1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 KRT18P22-201ENST00000402024 1347 ntBASIC20.07■□□□□ 0.8
TWNKQ96RR1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.07■□□□□ 0.8
TWNKQ96RR1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.07■□□□□ 0.8
TWNKQ96RR1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.07■□□□□ 0.8
TWNKQ96RR1 LINC01023-201ENST00000606054 436 ntBASIC20.07■□□□□ 0.8
TWNKQ96RR1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TWNKQ96RR1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TWNKQ96RR1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TWNKQ96RR1 RCC2P3-201ENST00000418112 1537 ntBASIC20.07■□□□□ 0.8
TWNKQ96RR1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TWNKQ96RR1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TWNKQ96RR1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TWNKQ96RR1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TWNKQ96RR1 AC128688.1-201ENST00000487626 519 ntBASIC20.06■□□□□ 0.8
TWNKQ96RR1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 AC010653.2-201ENST00000623505 997 ntBASIC20.06■□□□□ 0.8
TWNKQ96RR1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TWNKQ96RR1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TWNKQ96RR1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TWNKQ96RR1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.06■□□□□ 0.8
TWNKQ96RR1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TWNKQ96RR1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TWNKQ96RR1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TWNKQ96RR1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TWNKQ96RR1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TWNKQ96RR1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TWNKQ96RR1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 SLC25A3P1-201ENST00000443844 931 ntBASIC20.05■□□□□ 0.8
TWNKQ96RR1 AC010203.1-204ENST00000548782 407 ntBASIC20.05■□□□□ 0.8
TWNKQ96RR1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TWNKQ96RR1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 AC068587.9-201ENST00000641814 219 ntBASIC20.05■□□□□ 0.8
TWNKQ96RR1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TWNKQ96RR1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.05■□□□□ 0.8
TWNKQ96RR1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TWNKQ96RR1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.04■□□□□ 0.8
TWNKQ96RR1 KRT8P45-201ENST00000414328 1447 ntBASIC20.04■□□□□ 0.8
TWNKQ96RR1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.04■□□□□ 0.8
TWNKQ96RR1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.04■□□□□ 0.8
TWNKQ96RR1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.04■□□□□ 0.8
TWNKQ96RR1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
TWNKQ96RR1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.04■□□□□ 0.8
TWNKQ96RR1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TWNKQ96RR1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TWNKQ96RR1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TWNKQ96RR1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TWNKQ96RR1 AC008556.1-201ENST00000610908 2040 ntBASIC20.03■□□□□ 0.8
TWNKQ96RR1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms