Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST1H2AAQ96QV6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 AC133681.1-201ENST00000465482 601 ntBASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 C1QBPP2-201ENST00000528754 825 ntBASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 AC124016.1-201ENST00000609552 612 ntBASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST1H2AAQ96QV6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 AL161938.1-201ENST00000569833 2180 ntBASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 TSPY21P-201ENST00000433481 731 ntBASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 HLA-A-209ENST00000638375 975 ntBASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HIST1H2AAQ96QV6 AC026471.1-201ENST00000564629 3026 ntBASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 FP475955.4-201ENST00000623131 1990 ntBASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 IRX1P1-201ENST00000438849 1838 ntBASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 TNXA-203ENST00000507684 2038 ntBASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 AP002982.1-201ENST00000492365 877 ntBASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 AC131212.4-201ENST00000623606 975 ntBASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HIST1H2AAQ96QV6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H2AAQ96QV6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H2AAQ96QV6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST1H2AAQ96QV6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST1H2AAQ96QV6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms