Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF48Q96MX3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 PCED1CP-201ENST00000419887 785 ntBASIC15.39■□□□□ 0.05
ZNF48Q96MX3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 AL671277.2-201ENST00000458060 996 ntBASIC15.39■□□□□ 0.05
ZNF48Q96MX3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 PRSS44-201ENST00000515154 1146 ntBASIC15.39■□□□□ 0.05
ZNF48Q96MX3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 AL121956.5-201ENST00000625261 221 ntBASIC15.39■□□□□ 0.05
ZNF48Q96MX3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF48Q96MX3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 BX323043.1-201ENST00000641006 1765 ntBASIC15.38■□□□□ 0.05
ZNF48Q96MX3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF48Q96MX3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 AC009947.2-201ENST00000444014 672 ntBASIC15.37■□□□□ 0.05
ZNF48Q96MX3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 AC008622.2-201ENST00000617006 1229 ntBASIC15.37■□□□□ 0.05
ZNF48Q96MX3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF48Q96MX3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms