Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.03■□□□□ 0.8
CALR3Q96L12 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.03■□□□□ 0.8
CALR3Q96L12 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.03■□□□□ 0.8
CALR3Q96L12 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CALR3Q96L12 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.03■□□□□ 0.8
CALR3Q96L12 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CALR3Q96L12 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CALR3Q96L12 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CALR3Q96L12 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CALR3Q96L12 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CALR3Q96L12 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.02■□□□□ 0.8
CALR3Q96L12 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.02■□□□□ 0.8
CALR3Q96L12 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.02■□□□□ 0.8
CALR3Q96L12 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.02■□□□□ 0.8
CALR3Q96L12 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.02■□□□□ 0.8
CALR3Q96L12 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.02■□□□□ 0.8
CALR3Q96L12 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CALR3Q96L12 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.02■□□□□ 0.8
CALR3Q96L12 AL109923.1-201ENST00000618799 583 ntBASIC20.02■□□□□ 0.8
CALR3Q96L12 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.02■□□□□ 0.8
CALR3Q96L12 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.02■□□□□ 0.8
CALR3Q96L12 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CALR3Q96L12 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CALR3Q96L12 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CALR3Q96L12 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CALR3Q96L12 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CALR3Q96L12 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CALR3Q96L12 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CALR3Q96L12 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CALR3Q96L12 NOC2LP2-201ENST00000407594 1944 ntBASIC20.02■□□□□ 0.79
CALR3Q96L12 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.02■□□□□ 0.79
CALR3Q96L12 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.01■□□□□ 0.79
CALR3Q96L12 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CALR3Q96L12 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CALR3Q96L12 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CALR3Q96L12 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CALR3Q96L12 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CALR3Q96L12 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.01■□□□□ 0.79
CALR3Q96L12 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.01■□□□□ 0.79
CALR3Q96L12 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CALR3Q96L12 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CALR3Q96L12 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.01■□□□□ 0.79
CALR3Q96L12 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20■□□□□ 0.79
CALR3Q96L12 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20■□□□□ 0.79
CALR3Q96L12 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 AR-207ENST00000612010 3896 ntTSL 5 BASIC20■□□□□ 0.79
CALR3Q96L12 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CALR3Q96L12 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20■□□□□ 0.79
CALR3Q96L12 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20■□□□□ 0.79
CALR3Q96L12 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20■□□□□ 0.79
CALR3Q96L12 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20■□□□□ 0.79
CALR3Q96L12 AC098934.4-201ENST00000564127 592 ntBASIC20■□□□□ 0.79
CALR3Q96L12 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20■□□□□ 0.79
CALR3Q96L12 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20■□□□□ 0.79
CALR3Q96L12 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20■□□□□ 0.79
CALR3Q96L12 MYC-208ENST00000641036 567 ntBASIC20■□□□□ 0.79
CALR3Q96L12 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 KRT8P41-201ENST00000533985 1514 ntBASIC20■□□□□ 0.79
CALR3Q96L12 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CALR3Q96L12 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 HEIH-201ENST00000623091 1652 ntBASIC20■□□□□ 0.79
CALR3Q96L12 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CALR3Q96L12 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20■□□□□ 0.79
CALR3Q96L12 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20■□□□□ 0.79
CALR3Q96L12 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.99■□□□□ 0.79
CALR3Q96L12 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CALR3Q96L12 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.99■□□□□ 0.79
CALR3Q96L12 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CALR3Q96L12 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CALR3Q96L12 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.99■□□□□ 0.79
CALR3Q96L12 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.99■□□□□ 0.79
CALR3Q96L12 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.99■□□□□ 0.79
CALR3Q96L12 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.99■□□□□ 0.79
CALR3Q96L12 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.99■□□□□ 0.79
CALR3Q96L12 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.99■□□□□ 0.79
CALR3Q96L12 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.99■□□□□ 0.79
CALR3Q96L12 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CALR3Q96L12 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms