Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 AP006587.1-201ENST00000534129 1502 ntBASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 ATG10-IT1-201ENST00000396880 487 ntBASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 MTND4LP31-201ENST00000514859 294 ntBASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 AL451086.1-201ENST00000605596 223 ntBASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 NBPF21P-201ENST00000425093 1451 ntBASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 AC009237.14-201ENST00000609975 1594 ntBASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MS4A3Q96HJ5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 AC005520.3-201ENST00000602874 370 ntBASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 AC097376.1-201ENST00000602907 997 ntBASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 AC013470.4-201ENST00000619978 986 ntBASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 AP000484.1-201ENST00000620067 1252 ntBASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 TREX1-205ENST00000625293 1783 ntBASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MS4A3Q96HJ5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.09■□□□□ 0.33
MS4A3Q96HJ5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms