Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 UNC93B2-201ENST00000285383 730 ntBASIC19.48■□□□□ 0.71
IFT43Q96FT9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT43Q96FT9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
IFT43Q96FT9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 AC116562.2-201ENST00000507042 360 ntBASIC19.47■□□□□ 0.71
IFT43Q96FT9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.47■□□□□ 0.71
IFT43Q96FT9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT43Q96FT9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 MIR1224-201ENST00000408193 85 ntBASIC19.46■□□□□ 0.71
IFT43Q96FT9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 RBM17P1-201ENST00000453646 1190 ntBASIC19.46■□□□□ 0.71
IFT43Q96FT9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 REXO1L10P-201ENST00000615707 1290 ntBASIC19.46■□□□□ 0.71
IFT43Q96FT9 AL445675.2-201ENST00000620291 557 ntBASIC19.46■□□□□ 0.71
IFT43Q96FT9 AC131212.4-201ENST00000623606 975 ntBASIC19.46■□□□□ 0.71
IFT43Q96FT9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IFT43Q96FT9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
IFT43Q96FT9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.45■□□□□ 0.7
IFT43Q96FT9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
IFT43Q96FT9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.45■□□□□ 0.7
IFT43Q96FT9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IFT43Q96FT9 KRT16P1-201ENST00000399124 1418 ntBASIC19.45■□□□□ 0.7
IFT43Q96FT9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms