Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SPDL1Q96EA4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPDL1Q96EA4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPDL1Q96EA4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPDL1Q96EA4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPDL1Q96EA4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPDL1Q96EA4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.64■□□□□ 0.58
SPDL1Q96EA4 AL391005.1-201ENST00000623953 2435 ntBASIC18.64■□□□□ 0.58
SPDL1Q96EA4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
SPDL1Q96EA4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 MKRN4P-201ENST00000444706 1521 ntBASIC18.64■□□□□ 0.57
SPDL1Q96EA4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPDL1Q96EA4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 AC141586.3-201ENST00000562166 1838 ntBASIC18.63■□□□□ 0.57
SPDL1Q96EA4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 AC116351.2-201ENST00000606540 1585 ntBASIC18.63■□□□□ 0.57
SPDL1Q96EA4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 TEX21P-204ENST00000641479 1693 ntBASIC18.63■□□□□ 0.57
SPDL1Q96EA4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
SPDL1Q96EA4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 AC016769.1-201ENST00000409132 1010 ntBASIC18.62■□□□□ 0.57
SPDL1Q96EA4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 AC011767.1-201ENST00000617410 1153 ntBASIC18.62■□□□□ 0.57
SPDL1Q96EA4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.62■□□□□ 0.57
SPDL1Q96EA4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms