Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM43Q96BQ3 AC124864.1-201ENST00000623408 392 ntBASIC20.55■□□□□ 0.88
TRIM43Q96BQ3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM43Q96BQ3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM43Q96BQ3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM43Q96BQ3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM43Q96BQ3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM43Q96BQ3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM43Q96BQ3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 NUS1P2-201ENST00000417358 873 ntBASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 AL031284.1-201ENST00000419297 478 ntBASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 KRT18P23-201ENST00000435622 1283 ntBASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 RN7SL606P-201ENST00000472779 293 ntBASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 AC148477.8-201ENST00000624298 468 ntBASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRIM43Q96BQ3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 AC106730.1-201ENST00000566722 1090 ntBASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 GPR32P1-201ENST00000601788 811 ntBASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM43Q96BQ3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM43Q96BQ3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM43Q96BQ3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 AL512408.1-201ENST00000569378 2000 ntBASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 AL391422.3-201ENST00000603791 2761 ntBASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM43Q96BQ3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM43Q96BQ3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms