Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 AP003097.1-201ENST00000530657 1135 ntBASIC17.01■□□□□ 0.31
PTP4A1Q93096 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 AC008403.3-201ENST00000598924 454 ntBASIC17.01■□□□□ 0.31
PTP4A1Q93096 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.01■□□□□ 0.31
PTP4A1Q93096 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTP4A1Q93096 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
PTP4A1Q93096 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PTP4A1Q93096 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
PTP4A1Q93096 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17■□□□□ 0.31
PTP4A1Q93096 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 F2R-202ENST00000505600 442 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17■□□□□ 0.31
PTP4A1Q93096 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17■□□□□ 0.31
PTP4A1Q93096 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 AL160286.2-201ENST00000567150 934 ntBASIC17■□□□□ 0.31
PTP4A1Q93096 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17■□□□□ 0.31
PTP4A1Q93096 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTP4A1Q93096 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTP4A1Q93096 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 TSPY23P-201ENST00000440136 739 ntBASIC16.99■□□□□ 0.31
PTP4A1Q93096 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.99■□□□□ 0.31
PTP4A1Q93096 HLA-A-209ENST00000638375 975 ntBASIC16.99■□□□□ 0.31
PTP4A1Q93096 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTP4A1Q93096 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTP4A1Q93096 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTP4A1Q93096 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.98■□□□□ 0.31
PTP4A1Q93096 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.98■□□□□ 0.31
PTP4A1Q93096 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.98■□□□□ 0.31
PTP4A1Q93096 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PTP4A1Q93096 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.98■□□□□ 0.31
PTP4A1Q93096 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTP4A1Q93096 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTP4A1Q93096 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms