Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 C2orf69P4-201ENST00000565394 541 ntBASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.82■□□□□ 0.92
ATRIPQ8WXE1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 ARMC10P1-201ENST00000313754 855 ntBASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 AC023632.3-201ENST00000521633 145 ntBASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATRIPQ8WXE1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 TMPOP1-202ENST00000424642 1267 ntBASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 SDHAP1-207ENST00000440850 2000 ntBASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATRIPQ8WXE1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATRIPQ8WXE1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms