Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 AC009053.2-201ENST00000563701 2365 ntBASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 ZNRF2P3-201ENST00000424200 374 ntBASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 AC068338.2-201ENST00000563278 1430 ntBASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNIH3Q8TBE1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 AL589743.5-201ENST00000616611 1050 ntBASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNIH3Q8TBE1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CNIH3Q8TBE1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms