Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 GCSHP2-201ENST00000560971 527 ntBASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHKBP1Q8TBC3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 AC005332.1-201ENST00000577698 1310 ntBASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 CR769767.2-201ENST00000622735 460 ntBASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHKBP1Q8TBC3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 TSPY21P-201ENST00000433481 731 ntBASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 AL158211.5-201ENST00000623583 2518 ntBASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SHKBP1Q8TBC3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms