Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SETD9Q8NE22 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SETD9Q8NE22 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SETD9Q8NE22 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SETD9Q8NE22 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SETD9Q8NE22 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SETD9Q8NE22 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 AL589743.5-201ENST00000616611 1050 ntBASIC17.38■□□□□ 0.37
SETD9Q8NE22 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.38■□□□□ 0.37
SETD9Q8NE22 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SETD9Q8NE22 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SETD9Q8NE22 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SETD9Q8NE22 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 SIRPAP1-201ENST00000448467 1770 ntBASIC17.36■□□□□ 0.37
SETD9Q8NE22 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SETD9Q8NE22 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SETD9Q8NE22 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SETD9Q8NE22 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.35■□□□□ 0.37
SETD9Q8NE22 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms