Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RDH13Q8NBN7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 AC004408.2-201ENST00000623613 2777 ntBASIC20.72■□□□□ 0.91
RDH13Q8NBN7 UNC93B2-201ENST00000285383 730 ntBASIC20.72■□□□□ 0.91
RDH13Q8NBN7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 PRSS44-201ENST00000515154 1146 ntBASIC20.72■□□□□ 0.91
RDH13Q8NBN7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 AP000525.1-201ENST00000608286 694 ntBASIC20.72■□□□□ 0.91
RDH13Q8NBN7 AC006333.2-201ENST00000607957 2099 ntBASIC20.72■□□□□ 0.91
RDH13Q8NBN7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RDH13Q8NBN7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 AL390955.1-201ENST00000428694 934 ntBASIC20.71■□□□□ 0.91
RDH13Q8NBN7 MFAP1P1-201ENST00000442257 1255 ntBASIC20.71■□□□□ 0.91
RDH13Q8NBN7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RDH13Q8NBN7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
RDH13Q8NBN7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.7■□□□□ 0.91
RDH13Q8NBN7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.7■□□□□ 0.9
RDH13Q8NBN7 BX323043.1-201ENST00000641006 1765 ntBASIC20.69■□□□□ 0.9
RDH13Q8NBN7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.69■□□□□ 0.9
RDH13Q8NBN7 DGCR10-201ENST00000609839 495 ntBASIC20.69■□□□□ 0.9
RDH13Q8NBN7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH13Q8NBN7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms