Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CCDC89Q8N998 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
CCDC89Q8N998 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC89Q8N998 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.64■□□□□ 0.74
CCDC89Q8N998 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
CCDC89Q8N998 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 AC004264.1-201ENST00000608354 794 ntBASIC19.64■□□□□ 0.73
CCDC89Q8N998 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.64■□□□□ 0.73
CCDC89Q8N998 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC89Q8N998 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC89Q8N998 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 BICD1-207ENST00000551848 1962 ntBASIC19.63■□□□□ 0.73
CCDC89Q8N998 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC89Q8N998 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC89Q8N998 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.62■□□□□ 0.73
CCDC89Q8N998 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 ANO7L1-203ENST00000602586 1720 ntBASIC19.62■□□□□ 0.73
CCDC89Q8N998 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC89Q8N998 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC89Q8N998 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms