Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC007375.3-201ENST00000600936 2314 ntBASIC14.79□□□□□ -0.04
C3orf56Q8N813 AP001271.2-201ENST00000624018 1556 ntBASIC14.79□□□□□ -0.04
C3orf56Q8N813 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.79□□□□□ -0.04
C3orf56Q8N813 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 MRPL3P1-201ENST00000400109 1033 ntBASIC14.78□□□□□ -0.04
C3orf56Q8N813 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
C3orf56Q8N813 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
C3orf56Q8N813 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C3orf56Q8N813 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C3orf56Q8N813 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C3orf56Q8N813 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.77□□□□□ -0.04
C3orf56Q8N813 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
C3orf56Q8N813 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
C3orf56Q8N813 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
C3orf56Q8N813 FBXW4P1-201ENST00000426721 2239 ntBASIC14.77□□□□□ -0.04
C3orf56Q8N813 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
C3orf56Q8N813 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C3orf56Q8N813 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
C3orf56Q8N813 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
C3orf56Q8N813 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
C3orf56Q8N813 HLA-A-201ENST00000376802 1334 ntBASIC14.77□□□□□ -0.04
C3orf56Q8N813 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
C3orf56Q8N813 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
C3orf56Q8N813 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.77□□□□□ -0.05
C3orf56Q8N813 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.77□□□□□ -0.05
C3orf56Q8N813 AF228730.7-201ENST00000641842 219 ntBASIC14.77□□□□□ -0.05
C3orf56Q8N813 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.77□□□□□ -0.05
C3orf56Q8N813 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.77□□□□□ -0.05
C3orf56Q8N813 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
C3orf56Q8N813 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
C3orf56Q8N813 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 AC074051.2-201ENST00000565115 352 ntBASIC14.76□□□□□ -0.05
C3orf56Q8N813 AL353801.3-201ENST00000609898 542 ntBASIC14.76□□□□□ -0.05
C3orf56Q8N813 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.76□□□□□ -0.05
C3orf56Q8N813 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
C3orf56Q8N813 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
C3orf56Q8N813 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
C3orf56Q8N813 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
C3orf56Q8N813 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms