Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.45■□□□□ 0.7
PAF1Q8N7H5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.45■□□□□ 0.7
PAF1Q8N7H5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PAF1Q8N7H5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 UNC93B2-201ENST00000285383 730 ntBASIC19.44■□□□□ 0.7
PAF1Q8N7H5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 SLC25A1P4-201ENST00000567977 778 ntBASIC19.44■□□□□ 0.7
PAF1Q8N7H5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAF1Q8N7H5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 Z82202.1-201ENST00000623446 1880 ntBASIC19.43■□□□□ 0.7
PAF1Q8N7H5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.43■□□□□ 0.7
PAF1Q8N7H5 REXO1L10P-201ENST00000615707 1290 ntBASIC19.43■□□□□ 0.7
PAF1Q8N7H5 REXO1L12P-201ENST00000622156 912 ntBASIC19.43■□□□□ 0.7
PAF1Q8N7H5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 RCC2P6-201ENST00000526625 1557 ntBASIC19.43■□□□□ 0.7
PAF1Q8N7H5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.43■□□□□ 0.7
PAF1Q8N7H5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 FAM207BP-201ENST00000447172 505 ntBASIC19.42■□□□□ 0.7
PAF1Q8N7H5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 AL355075.4-201ENST00000554988 638 ntBASIC19.42■□□□□ 0.7
PAF1Q8N7H5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PAF1Q8N7H5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PAF1Q8N7H5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms