Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 AC083849.1-201ENST00000615227 514 ntBASIC29.59■■■□□ 2.33
VPS8Q8N3P4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 HOXB1-202ENST00000577092 1414 ntBASIC29.59■■■□□ 2.33
VPS8Q8N3P4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
VPS8Q8N3P4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
VPS8Q8N3P4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 SAPCD2P2-201ENST00000431719 1174 ntBASIC29.57■■■□□ 2.32
VPS8Q8N3P4 AL590326.2-201ENST00000625139 305 ntBASIC29.57■■■□□ 2.32
VPS8Q8N3P4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
VPS8Q8N3P4 NFYC-AS1-201ENST00000606277 1687 ntBASIC29.57■■■□□ 2.32
VPS8Q8N3P4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
VPS8Q8N3P4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 STARP1-201ENST00000397973 869 ntBASIC29.55■■■□□ 2.32
VPS8Q8N3P4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC29.55■■■□□ 2.32
VPS8Q8N3P4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 HOMER2P1-201ENST00000455653 964 ntBASIC29.54■■■□□ 2.32
VPS8Q8N3P4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 AL031432.5-201ENST00000641059 760 ntBASIC29.54■■■□□ 2.32
VPS8Q8N3P4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
VPS8Q8N3P4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC29.54■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms