Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 FAM197Y1-201ENST00000421178 764 ntBASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 AC098590.1-201ENST00000468126 897 ntBASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 B3GAT3P1-201ENST00000471720 806 ntBASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 CKBP1-201ENST00000565489 1086 ntBASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF440Q8IYI8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 AL020996.1-203ENST00000536896 2307 ntBASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF440Q8IYI8 AL512353.2-201ENST00000448759 1962 ntBASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 RPS2P55-201ENST00000397318 883 ntBASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 AC011506.1-201ENST00000474329 610 ntBASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 AC107956.1-201ENST00000494359 873 ntBASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 AP000692.2-201ENST00000608391 879 ntBASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 DGCR10-201ENST00000609839 495 ntBASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF440Q8IYI8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF440Q8IYI8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF440Q8IYI8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF440Q8IYI8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms