Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 AL161938.1-201ENST00000569833 2180 ntBASIC16.7■□□□□ 0.26
RTTNQ86VV8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 AC005521.1-201ENST00000393351 872 ntBASIC16.7■□□□□ 0.26
RTTNQ86VV8 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.7■□□□□ 0.26
RTTNQ86VV8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTTNQ86VV8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.7■□□□□ 0.26
RTTNQ86VV8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 AP002982.1-201ENST00000492365 877 ntBASIC16.69■□□□□ 0.26
RTTNQ86VV8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 MIR6786-201ENST00000616843 113 ntBASIC16.69■□□□□ 0.26
RTTNQ86VV8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 KRT8P9-201ENST00000558927 1449 ntBASIC16.69■□□□□ 0.26
RTTNQ86VV8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 AC026271.3-201ENST00000571884 352 ntBASIC16.69■□□□□ 0.26
RTTNQ86VV8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 AC006333.2-201ENST00000607957 2099 ntBASIC16.69■□□□□ 0.26
RTTNQ86VV8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTTNQ86VV8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.69■□□□□ 0.26
RTTNQ86VV8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 REXO1L10P-201ENST00000615707 1290 ntBASIC16.68■□□□□ 0.26
RTTNQ86VV8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RTTNQ86VV8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTTNQ86VV8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms