Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LYSMD3Q7Z3D4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.02■□□□□ 0.64
LYSMD3Q7Z3D4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LYSMD3Q7Z3D4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LYSMD3Q7Z3D4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
LYSMD3Q7Z3D4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LYSMD3Q7Z3D4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
LYSMD3Q7Z3D4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LYSMD3Q7Z3D4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 MMP23A-201ENST00000234610 1017 ntBASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD3Q7Z3D4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 AC211429.1-201ENST00000415277 523 ntBASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 AC087499.1-201ENST00000418141 1075 ntBASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 CYP2D8P-201ENST00000433633 1490 ntBASIC19■□□□□ 0.63
LYSMD3Q7Z3D4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms